PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Aqcoe3G339800.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Nin-like

Protein Properties

Length: 339aa MW: 38764 Da PI: 4.7975

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G339800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	84.2	1.2e-26	168	217	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 e++ +++++yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl Aqcoe3G339800.1.p 168 TELTRKTIAQYFYMPITQAAKELNVGLTLLKKRCRELGIPRWPHRKLMSL 217 6899*******************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	18.03	153	237	IPR003035	RWP-RK domain
Pfam	PF02042	2.1E-22	170	217	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MDQKHTSVQN ISFSTTTSHG FETVSNLFEE DPFFMSQKIH PLDFSGDSNF NYPWEFPMQD 60 DNVLDAIPLM ECLPTDPLLY ASLDASLDII PSENSTTNCQ GDLYKRWEEE FGAFDEMSVC 120 QFESDNKQIV LYDNGDQMSS NNSGDGVWND QKKVNRCSER KITNTSSTEL TRKTIAQYFY 180 MPITQAAKEL NVGLTLLKKR CRELGIPRWP HRKLMSLQTL IKNVQEMEDG DAGDTKIRDA 240 IELLEQQKKL MEEMPEVELE EKTKKLRQAC FKANYKKRKL MGMIEWPSSP NSHLSIESME 300 TSTAASNKRL GFWKCTFFIL VCCIGVCNSS LTSLFQTM*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010258431.1	1e-75	PREDICTED: protein RKD1-like
TrEMBL	A0A1U8AA29	3e-74	A0A1U8AA29_NELNU; protein RKD1-like
STRING	XP_010258431.1	6e-75	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	3e-39	RWP-RK domain-containing protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G339800.1.p