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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aqcoe3G085900.4.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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| Family |
HD-ZIP |
| Protein Properties |
Length: 271aa MW: 30813.5 Da PI: 6.1723 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aqcoe3G085900.4.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.2 | 1.2e-17 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
Aqcoe3G085900.4.p 68 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARVLGLQPRQIAIWFQNRRARWK 121
456899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 130 | 9.2e-42 | 67 | 159 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+ eqvk+LE++Fe +kLeperK++lar Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++da+k++n++L++++++L++e++
Aqcoe3G085900.4.p 67 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARVLGLQPRQIAIWFQNRRARWKTKQLEKDYDILKRQFDAVKDNNDALQAQNKKLQAEIM 158
69**************************************************************************************9997 PP
HD-ZIP_I/II 93 e 93
+
Aqcoe3G085900.4.p 159 A 159
5 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MTCNEMDFFP TNFMFQSHHE ENHHPPTTLN PILPLCVASL LGKRSMSFSG VENGDEDLSD 60
DGSQAGEKKR RLNMEQVKTL EKNFELGNKL EPERKMQLAR VLGLQPRQIA IWFQNRRARW 120
KTKQLEKDYD ILKRQFDAVK DNNDALQAQN KKLQAEIMAL KGGEPTESIN LNKETEGSCS 180
NRSENSSEIN LDISRTPAID SPLSSNPSRP LFPTSMRPAS IVQLLQSSSR ADAHCQKSQN 240
PTQEESICHI FNAIDDQPSF WPWSENQQYH *
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 115 | 123 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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