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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aqcoe3G016600.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 184aa MW: 20785.2 Da PI: 7.7498 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aqcoe3G016600.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.1 | 1.7e-19 | 39 | 92 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+ ++tkeq++ Lee F++nr ++a+++ LA +lgL+ rqV vWFqNrRa+ k
Aqcoe3G016600.2.p 39 KKLRLTKEQTDLLEESFKQNRVLNAKQKDALAFQLGLKPRQVEVWFQNRRARTK 92
56789***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 113.1 | 1.8e-36 | 38 | 127 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl+keq lLEesF++++ L+ ++K +la +Lgl+prqv+vWFqnrRARtk+kq+E+++e+Lk ++ +l+een+rL++e e+Lr +l
Aqcoe3G016600.2.p 38 NKKLRLTKEQTDLLEESFKQNRVLNAKQKDALAFQLGLKPRQVEVWFQNRRARTKLKQTEMECEYLKICFTTLTEENKRLQREAEQLR-AL 127
59*************************************************************************************9.55 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 184 aa
Download sequence Send
to blast |
MEEDQESWLA KANDDKYEEQ DSGGGGGGGG GDGYGSSNKK LRLTKEQTDL LEESFKQNRV 60
LNAKQKDALA FQLGLKPRQV EVWFQNRRAR TKLKQTEMEC EYLKICFTTL TEENKRLQRE 120
AEQLRALRRV GQPPNNCEPL PAESTLTMCP RCERVTSRSS SSTSNELRHS PQPSAYCPEV 180
LRI*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
| UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
