 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aqcoe2G368300.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
| Family |
C2H2 |
| Protein Properties |
Length: 214aa MW: 23813.8 Da PI: 7.804 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aqcoe2G368300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.4 | 0.00011 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C++ F++ L H+++H
Aqcoe2G368300.1.p 55 YSCTFCKREFRSAQALGGHMNVH 77
99*******************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008361 | Biological Process | regulation of cell size |
| GO:0009755 | Biological Process | hormone-mediated signaling pathway |
| GO:0010093 | Biological Process | specification of floral organ identity |
| GO:0010160 | Biological Process | formation of organ boundary |
| GO:0042127 | Biological Process | regulation of cell proliferation |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MEKSSWNKMK DGCGVDGKSF ITSNKKDVGE PWDYRNQQFH GEDLYSGFSW PPRSYSCTFC 60
KREFRSAQAL GGHMNVHRRD RARLRQYSPP WEGQTTSLNP NPSPSYSPIS SSSVYTTFPS 120
MLSPSLSCLP SSQSPAFSSE MKTPSVSTSP VVLESTCSNG EDLTKTMKTL KGFIQEDECR 180
ILKKGKMVLL DLEIGLHGSV NEDLDLELRL GYS*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1njq_A | 3e-13 | 50 | 77 | 2 | 29 | superman protein |
| 2l1o_A | 3e-13 | 50 | 77 | 2 | 29 | Transcriptional regulator SUPERMAN |
