PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Aqcoe2G332300.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 263aa MW: 29256.2 Da PI: 6.7292

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G332300.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18	5.2e-06	146	187	9	55
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r RR+r + + LrellP++ +K + ++ e++++YIk+Lq Aqcoe2G332300.2.p 146 DRLRRARKTENLKALRELLPHS-----RKGTILAVTEEVIDYIKYLQ 187 799****************8.....788899999********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.39E-5	135	191	No hit	No description
PROSITE profile	PS50888	11.045	137	186	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.36E-7	138	197	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.5E-6	140	196	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0098	143	192	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
MPQGLFLPVS SRARQTVFQF EEEIIGNNSG RASDFNATDF SYNMDAKKVS MLGANDNSHK 60 DLQNSHVNLD KDYCDVPTGG ELILYGEGGS QRKLLSAANR NGDIDQNHTL TAQEPIREGI 120 KSSQHPAVIP RPTPRKRAAT ESSSSDRLRR ARKTENLKAL RELLPHSRKG TILAVTEEVI 180 DYIKYLQLQI KVLTQSRLGG EPTFDPFIHL EGFGHYLLHD QMLNEPLEMT IGRMMEGNML 240 AVTQLLETKG LYVMPIPSEP GP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5C141	0.0	A0A2G5C141_AQUCA; Uncharacterized protein
STRING	Aquca_135_00013.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	8e-22	LJRHL1-like 1

Link Out ? help Back to Top
Phytozome	Aqcoe2G332300.2.p