PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G212600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 328aa    MW: 35660.5 Da    PI: 5.6042
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G212600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021229251123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ++C++Cg  Fs+   L  H+r+H
  Aqcoe2G212600.1.p 229 HECSICGSEFSSGQALGGHMRRH 251
                        78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.53E-8154177No hitNo description
PfamPF139122.0E-10154179IPR007087Zinc finger, C2H2
SMARTSM003550.17155177IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.263155182IPR007087Zinc finger, C2H2
PROSITE patternPS000280157177IPR007087Zinc finger, C2H2
SuperFamilySSF576671.53E-8224251No hitNo description
PfamPF139121.4E-11228252IPR007087Zinc finger, C2H2
SMARTSM003550.02229251IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.034229256IPR007087Zinc finger, C2H2
PROSITE patternPS000280231251IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MIMEVVAMEE VIGSSNNDHV QIVKGKRTKR QRPSSPLAMV GGMMTTSNSS SGGDQGDVGF  60
DGNNDNGIGV IGVGGSGDPN ICDDQLPTTS TEELVESTTE EEEDMANCLI LLAQGYSLDN  120
SKQFEDDNGV MEKFNSRRFT EAPTTTTSKA GYYVYQCKTC SRCFPSFQAL GGHRASHKKP  180
KSMVGEKKTL LLLEYDDHSQ FNNNNNPSLN LQMGNRATTP YASNKSKVHE CSICGSEFSS  240
GQALGGHMRR HRTSTTANMT STTSTTMDTV LTESHQEPTN KKSRNVLSLD LNLPAPEEDR  300
ESKFATFASK QQPLVFSTTT SLVDCHY*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00487DAPTransfer from AT5G04390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243202.11e-95PREDICTED: zinc finger protein ZAT5
TrEMBLA0A2G5DJA60.0A0A2G5DJA6_AQUCA; Uncharacterized protein
STRINGAquca_019_00189.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-51C2H2 family protein