 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Aqcoe1G013600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 381aa MW: 41920.2 Da PI: 7.913 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aqcoe1G013600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55 | 1.3e-17 | 208 | 262 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ +++ L+k+l+L rqV vWFqNrRa+ k
Aqcoe1G013600.1.p 208 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALSKQLNLRPRQVEVWFQNRRARTK 262
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 123.9 | 7.7e-40 | 208 | 297 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlskeq+++LEesF+e+++L+p++K +l+++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++d l+een+rL+ke +eLr +l
Aqcoe1G013600.1.p 208 RKKLRLSKEQSAFLEESFKEHNTLNPKQKLALSKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRRCDFLTEENRRLHKEIQELR-AL 297
69*************************************************************************************9.55 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MELGLSLGET TSSSSRQQTF TFVDKPSTTS TTATKMVNNN KGLGFCMSLG LSGFNNATEE 60
EQQHHREREV RKKDGRNDKE KRSTDLPDPS PLQLDLLPIA SVPRNPAPST QGLPWLSENG 120
NSEAGSSGQL GVSVRGFDVN QSPSTEEVDD GAAVSSPNST VSSFQIDFSI YRGGNGNKRD 180
SETAGLNEAE ADRTSSKASD DDENGSGRKK LRLSKEQSAF LEESFKEHNT LNPKQKLALS 240
KQLNLRPRQV EVWFQNRRAR TKLKQTEVDC EYLKRRCDFL TEENRRLHKE IQELRALKSS 300
QPYYMQLPAT TLTMCPSCER VATTTPTTTT TTTTTTNNSG SAENSTTTTI NTPIGSGFSL 360
TKPRYYPFSH PHPHQSAAPS *
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 256 | 264 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
