PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Basic Information? help Back to Top

TF ID

Ahy022186

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Dof

Protein Properties

Length: 96aa MW: 10984.1 Da PI: 9.358

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S56348394	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.3	6.2e-37	13	70	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 +e+ ++cprCds+ntkfCy+nnysls PryfCkaC+ryWt GG+lrn+PvGgg+r ++ Ahy022186 13 EEEGVNCPRCDSSNTKFCYFNNYSLSSPRYFCKACKRYWTIGGTLRNIPVGGGARARR 70 57899**************************************************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-21	16	67	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.6E-31	16	69	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.86	17	71	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	19	55	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 96 aa Download sequence Send to blast
MERAEEQQQK QREEEGVNCP RCDSSNTKFC YFNNYSLSSP RYFCKACKRY WTIGGTLRNI 60 PVGGGARARR LNHPNTTPSR SSLNQINNNS DVNHPS

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor specifically involved in the maternal control of seed germination. Regulates transcription by binding to a 5'-AA[AG]G-3' consensus core sequence. May ensure the inactivity of a component that would be activated to trigger germination as a consequence of red light perception.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020968478.1	7e-43	dof zinc finger protein DOF1.4 isoform X1
Swissprot	Q43385	2e-29	DOF37_ARATH; Dof zinc finger protein DOF3.7
TrEMBL	A0A445BBJ8	2e-61	A0A445BBJ8_ARAHY; Uncharacterized protein
STRING	XP_008439843.1	3e-29	(Cucumis melo)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.3	1e-28	Dof family protein