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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy021237 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | VOZ | ||||||||
Protein Properties | Length: 477aa MW: 53096.7 Da PI: 5.8282 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 446 | 4.4e-137 | 201 | 417 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkd+llfaalsa++qgk+vgipecegaatakspwna+elfdls+ Ahy021237 201 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMSPVLRPGGIGLKDNLLFAALSARAQGKDVGIPECEGAATAKSPWNAPELFDLSV 300 89************************************************************************************************** PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkv 200 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei+++da+alyrlelklvd+kk++k+kv Ahy021237 301 LEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKV 400 **************************************************************************************************** PP VOZ 201 skdsladlqkklgrlta 217 ++ds+adlqk++grl+a Ahy021237 401 TNDSVADLQKQMGRLSA 417 ***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence Send to blast |
MKKVSKTSCK SVSHRLFKDK AKNRVDDLQL MFLDLQFARK ESRTVDAAVL EEQVHQMLRE 60 WKAELNEPSP ASSLQQGGSL GSFSTDICRL LQLCEEEDDA SSPLAAPKPE PNDQTQQIGA 120 KVVFQEGQQQ HDFPLVDERK HSISGVQNVA ANNLEGPALE YHQFDLHQDF DHGFYTGFNG 180 IGYCEEDAIP QISSYLPSIC PPPSAFLGPK CALWDCPRPA QGLDWCQDYC SSFHAALALN 240 EGPPGMSPVL RPGGIGLKDN LLFAALSARA QGKDVGIPEC EGAATAKSPW NAPELFDLSV 300 LEGETIREWL FFDKPRRAFE SGNRKQRSLP DYSGRGWHES RKQVMNEFGG LKRSYYMDPQ 360 PLNHFEWHLY EYEISKCDAC ALYRLELKLV DGKKNSKAKV TNDSVADLQK QMGRLSAEFM 420 SDNKRPAKGR AKLNAKVGLG GVYSSSGRVA PLNGTYDYGL AAPYDYLVDN MGDYYGT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025690167.1 | 0.0 | transcription factor VOZ1 | ||||
Refseq | XP_025690168.1 | 0.0 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A445DR01 | 0.0 | A0A445DR01_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA07G32374.2 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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