PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018303
Common NameSPL1
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family SBP
Protein Properties Length: 835aa    MW: 91698.2 Da    PI: 7.1219
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59555975PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-15745PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP127.94e-40144221178
                --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
        SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                +Cqv++C++dls ak+yhrrhkvC+vhska+++lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+++
  Ahy018303 144 VCQVQDCRVDLSGAKDYHRRHKVCDVHSKATKALVGNVMQRFCQQCSRFHALEEFDEGKRSCRRRLAGHNRRRRKTHP 221
                6**************************************************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1100.101.0E-31139206IPR004333Transcription factor, SBP-box
PROSITE profilePS5114131.787142219IPR004333Transcription factor, SBP-box
SuperFamilySSF1036123.66E-37143223IPR004333Transcription factor, SBP-box
PfamPF031103.4E-29145218IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    Send to blast
MKGVGKRSLE WDLNDWRWDG DLFTAQQLNS VPSDCRSRQF FPPNPEIHAN NNAINASNSI  60
SSSINPVEEG KRELEKKRRA VVIGEGEERE ELNDEGGGGG GGGGSSLNLN LGAQVYPIMV  120
EGDEKSGKKT KVVETAATTS NRAVCQVQDC RVDLSGAKDY HRRHKVCDVH SKATKALVGN  180
VMQRFCQQCS RFHALEEFDE GKRSCRRRLA GHNRRRRKTH PDAAGVNGGS LNGERGSSYL  240
LMSLLRILSN MHSNGSDNTR NQDILSHLLG NLANLAGTLN ERSVASLLEG SQGLVNSRTP  300
EAAHNVPNLN SNGPEASRPS GSSIKTGNGA IRQDPPRSMV QCEAAPLNAV TEKCVPLSHG  360
AVAKLKPSGI QPSSNILLSR DSQPSQLIAA DTSVGRDHLN NIDLNNVYDD TQDCAENPKS  420
SSAPVGEVRS LDHPLWLQCN SLKSSPPQTS INSDSTSTQS PSSSSGEAQS RTDRIVFKLF  480
GKDPSDFPHV LRSQILNWLS HSPTEIESYI RPGCIVLTIY LRLEKSAWEE LSCNLGSSLS  540
KLASNDSFWT TGWVYTRVQQ SVAFLYNGQV VLDAPLHLRS PQNCRISCIK PLAVPKNANA  600
KFTVKGFNLF RSSTRMLCAF EGKYLVHDSS HDLIDVADVS DAAIQHLSFS CQIPNVTGRG  660
FVEVEDHGLS SCSFPFIVAE QEICTEICKL ENVIEAADAT DDVLLKSKQI EEKTRALEFL  720
QEMGWLLHRS RLNVRLGTLA PTQDPFHFSR FVWLVDFSMD HDWCAVVKKL LDIIFEDGVD  780
VGDHTSIELA LLDMGLLHKA VKRNSRPMVE LLLKFVPTKS SAGATKFLFR PDNVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ul4_A9e-291442181084squamosa promoter binding protein-like 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016194377.10.0squamosa promoter-binding-like protein 1 isoform X1
RefseqXP_025629585.10.0squamosa promoter-binding-like protein 1 isoform X1
TrEMBLA0A0K0KBH20.0A0A0K0KBH2_ARAHY; Squamosa promoter-binding-like protein
STRINGGLYMA09G09790.10.0(Glycine max)