PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy017995
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 272aa    MW: 30737.7 Da    PI: 8.5829
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54173396PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.2e-19202236135
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C++Cg+ +Tp+WR+gp g+ktLCnaCG+++++ +l
  Ahy017995 202 CQHCGSEETPQWRSGPLGPKTLCNACGVRFKSGRL 236
                *******************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004011.5E-15196246IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.176196232IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.75E-15198259No hitNo description
Gene3DG3DSA:3.30.50.101.2E-14200234IPR013088Zinc finger, NHR/GATA-type
CDDcd002027.05E-16201249No hitNo description
PfamPF003204.3E-17202236IPR000679Zinc finger, GATA-type
PROSITE patternPS003440202227IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
XVSFLSSQFQ LLQQLSVTQK VAKLKAFELG MEVPGTVDDL LDFSSDVGED NDAVVDRRRK  60
GFPCNPECKQ PSFNPLAMDD PNYSFSEFAE EELEWLSNKD AFPAVETFVD IPSIQPNMSK  120
HQGTASVLEY RRSIPNNNCT NNITLLNGFD HLKVPVRARS KCRSRPRLAI ADVSSHQSWW  180
RLSSREISGV EVIKIPTIGR KCQHCGSEET PQWRSGPLGP KTLCNACGVR FKSGRLVPEY  240
RPATSPTFRH ELHSNSHRKI IEMRKQKQMG MV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025633062.10.0GATA transcription factor 1
TrEMBLA0A445AHJ20.0A0A445AHJ2_ARAHY; Uncharacterized protein
STRINGGLYMA10G25480.11e-104(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-41GATA transcription factor 9