PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

Ahy015312

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GATA

Protein Properties

Length: 326aa MW: 35286 Da PI: 4.244

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59554503	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	26.7	7.5e-09	256	276	14	34
GATA 14 rgpdgnktLCnaCGlyyrkkg 34 +gp g+ktLCnaCG++y++ + Ahy015312 256 KGPMGPKTLCNACGVRYKSGR 276 5999**************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.50.10	3.4E-5	256	274	IPR013088	Zinc finger, NHR/GATA-type
Pfam	PF00320	1.1E-6	256	276	IPR000679	Zinc finger, GATA-type
SuperFamily	SSF57716	9.03E-5	256	300	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence Send to blast
MEVVVAKALK PSLRGELIFQ PPLALGDEFL CFNAVNNGAA VGEDFSVDDL LDFSEFQHGS 60 VGKGIDVSEE EEDEEDEEKD STSGSSSQDR TENDTNSNSS NAAVDSDSIF AGELSVPDDD 120 LADLEWVSHF VDDSIPELSL LYPVRSEQTR ARAQPEPKTG SAVTSLPHGV PVKPXDHEDK 180 EAQRPLIVVL WQLVLASLFA VLVLLLCAFL DGGASRFAWE AAGEEAEEKA RGASLWAPVS 240 ATVQSLPSSE NAAVEKGPMG PKTLCNACGV RYKSGRLFPE YRPACSPTFS GDIHSNSHRK 300 VLEMRRRKEM SGPEPSPDRA FMLPSC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025686702.1	1e-163	GATA transcription factor 5
TrEMBL	A0A445E2Y2	1e-162	A0A445E2Y2_ARAHY; GATA transcription factor
STRING	GLYMA12G04180.2	4e-89	(Glycine max)