PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Regulation |

Publication

Basic Information? help Back to Top

TF ID

Ahy014736

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 797aa MW: 91734.7 Da PI: 6.2428

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59556274	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	97.9	1.1e-30	90	181	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r+ tr+gCka l vk++++gkw v+ ++ eHnHel+p Ahy014736 90 FYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRtkDREIKRPRTITRVGCKAALSVKMHDSGKWIVSGFVREHNHELVP 181 9*************************************998888545677889*********************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.5E-29	90	181	IPR004330	FAR1 DNA binding domain
Pfam	PF10551	8.3E-32	302	394	IPR018289	MULE transposase domain
Pfam	PF04434	6.0E-11	570	616	IPR007527	Zinc finger, SWIM-type
PROSITE profile	PS50966	11.202	582	618	IPR007527	Zinc finger, SWIM-type
SMART	SM00575	1.1E-7	593	620	IPR006564	Zinc finger, PMZ-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008270	Molecular Function	zinc ion binding

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence Send to blast
MDNEVLEFDI GLEGGERECE DDEGDIEHPM AMAMAIEEDE LADADRGRGT ATSGSGGEIY 60 VPEGFGAGDL LDLEPYEGME FESEEAAKAF YNSYARRIGF STRVSSSRRS RRDGAIIQRQ 120 FVCAKEGFRN LNEKRTKDRE IKRPRTITRV GCKAALSVKM HDSGKWIVSG FVREHNHELV 180 PPDQVHCLRS HRQISGAAKT LIDTLQAAGM GPRRIMSALI KECGGISKVG FTEVDCRNYM 240 RNNRQRSLEG DIQLVLDYLR QMHAENPCFF YAVQSDEDQS MSNVFWADPK ARLNYTFFGD 300 TVTFDTTYRS NRYRLPFAPF TGVNHHGQPV LFGCAFLINE SEASFVWLFK TWLMAMSGRP 360 PLSITTDHDS VIRSAVLQVF PETRHRFCKW HIFKKCQEKL SHIFLKYPNF EVEFHRCVNL 420 TESIEEFESC WSTLIDRYDL RDHEWLQAIY SACKQWVPVY LRDTFFAEMS ITQRSDGMNS 480 YFDGYVNAST NLNQFFKLYE KALDSRNEKE VRADYDTMNS SPVLKTPSPM EKQASELYTR 540 KIFMRFQEEL VGTLTFMASK TEDDGEVVTY HVAKFGEDHK AYYVKFNVLE MKASCSCQMF 600 EFSGLVCRHV LAVFRVTNVL TLPAHYILKR WTRNAKSSVT LEEHSCDIYS YYLESHTVRY 660 NTLRHVAFKF VDEGAKSPET YDVAMGALQE ATKRVVQVMQ SEERILINNG KVRSHLQIDE 720 SHTNSRSGHE EGNLGQHMSE DDMDKSIREL MNELEFANRK CEIYRSNLLS VLKAVEDHKL 780 ELSIKVENIK ISIKDGL

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence Send to blast

MDNEVLEFDI GLEGGERECE DDEGDIEHPM AMAMAIEEDE LADADRGRGT ATSGSGGEIY  60
VPEGFGAGDL LDLEPYEGME FESEEAAKAF YNSYARRIGF STRVSSSRRS RRDGAIIQRQ  120
FVCAKEGFRN LNEKRTKDRE IKRPRTITRV GCKAALSVKM HDSGKWIVSG FVREHNHELV  180
PPDQVHCLRS HRQISGAAKT LIDTLQAAGM GPRRIMSALI KECGGISKVG FTEVDCRNYM  240
RNNRQRSLEG DIQLVLDYLR QMHAENPCFF YAVQSDEDQS MSNVFWADPK ARLNYTFFGD  300
TVTFDTTYRS NRYRLPFAPF TGVNHHGQPV LFGCAFLINE SEASFVWLFK TWLMAMSGRP  360
PLSITTDHDS VIRSAVLQVF PETRHRFCKW HIFKKCQEKL SHIFLKYPNF EVEFHRCVNL  420
TESIEEFESC WSTLIDRYDL RDHEWLQAIY SACKQWVPVY LRDTFFAEMS ITQRSDGMNS  480
YFDGYVNAST NLNQFFKLYE KALDSRNEKE VRADYDTMNS SPVLKTPSPM EKQASELYTR  540
KIFMRFQEEL VGTLTFMASK TEDDGEVVTY HVAKFGEDHK AYYVKFNVLE MKASCSCQMF  600
EFSGLVCRHV LAVFRVTNVL TLPAHYILKR WTRNAKSSVT LEEHSCDIYS YYLESHTVRY  660
NTLRHVAFKF VDEGAKSPET YDVAMGALQE ATKRVVQVMQ SEERILINNG KVRSHLQIDE  720
SHTNSRSGHE EGNLGQHMSE DDMDKSIREL MNELEFANRK CEIYRSNLLS VLKAVEDHKL  780
ELSIKVENIK ISIKDGL

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription activator involved in regulating light control of development.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269\|PubMed:15591448}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025665572.1	0.0	protein FAR1-RELATED SEQUENCE 5
Swissprot	Q9SZL8	0.0	FRS5_ARATH; Protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A371H944	0.0	A0A371H944_MUCPR; Protein FAR1-RELATED SEQUENCE 5 (Fragment)
STRING	XP_007142582.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1-related sequence 5

Publications ? help Back to Top
Joly-Lopez Z, et al. Abiotic Stress Phenotypes Are Associated with Conserved Genes Derived from Transposable Elements. Front Plant Sci, 2017. 8: p. 2027 [PMID:29250089]