PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy014098
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family LBD
Protein Properties Length: 237aa    MW: 25216.7 Da    PI: 6.266
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59521978PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26085.76.5e-274107199
     DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                +C++C+vlr++C+ +C++ p++     p++q++++ +++k++G++ +l+ll+a +++ r+++++sl+yeA+ r+ +Pv G++g++++++++l+++++e++
  Ahy014098   4 SCNGCRVLRKGCNLECPIKPCLnwiksPESQSNATLFLAKFYGRAGLLNLLTAGDPKIRPAIFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVEAV 103
                6************************************************************************************************998 PP

     DUF260  96 llke 99 
                l ++
  Ahy014098 104 LSGA 107
                8766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089115.7273109IPR004883Lateral organ boundaries, LOB
PfamPF031955.3E-224103IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MRLSCNGCRV LRKGCNLECP IKPCLNWIKS PESQSNATLF LAKFYGRAGL LNLLTAGDPK  60
IRPAIFKSLL YEACGRIVNP VFGSTGLLST GSWHLCEAAV EAVLSGAPIR QQDASDGGGQ  120
LLNPSDIRHV VKRGKSCSSD NVLKPRKSQF KRRAEKSKPE PEVKLDQGVA ELVVEACVVN  180
ELDDSASPDS GSGLSEHVSV VVGGGAEADS GSIESVNPAR ADDGELELEL TLGCQWL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966681.11e-170LOB domain-containing protein 41
TrEMBLA0A445D2Q91e-167A0A445D2Q9_ARAHY; Uncharacterized protein
STRINGGLYMA07G10180.14e-82(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.19e-62LOB domain-containing protein 41