PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy012470
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 305aa    MW: 32570.1 Da    PI: 4.9558
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59548678PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-27708PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS70.53.3e-22216304199
       GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                lv++L++cAeav++++l+la+al++++  la ++  +m+++a+yf+eALa+r+++    ly    p++  +++ s+ l  +  f+e++P+lkf+h+taN
  Ahy012470 216 LVHTLMACAEAVHQNNLSLAEALVKQIGFLAVSQVGAMRKVATYFAEALARRIYG----LY----PENPIHHSFSDML--QIHFYETCPYLKFAHFTAN 304
                689****************************************************....55....3333322234443..345***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF120412.1E-3150116IPR021914Transcriptional factor DELLA, N-terminal
SMARTSM011299.5E-3150122No hitNo description
PROSITE profilePS5098517.12190305IPR005202Transcription factor GRAS
PfamPF035141.1E-19216304IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
VPAPSPPSST PPTTSTIAGA YSGYSIHNGT TSSGKSKLWD ECAAADGGMD ELLAVVGYKV  60
RSSDMAEVAQ KLEQLEEAMG NARDGISQLS NDTVHFNPAD ISNWLETMIN NLDVPPPPPP  120
PLPQQHSVDS SSSSAAFLPQ TDSSTITTSV DRAFEDSSSS DYDLKAIAGK AIYTTAAATA  180
DSLSPSSKRV KPSPAESSSS TRPLVLVDSQ ENGIRLVHTL MACAEAVHQN NLSLAEALVK  240
QIGFLAVSQV GAMRKVATYF AEALARRIYG LYPENPIHHS FSDMLQIHFY ETCPYLKFAH  300
FTANX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2zsh_B2e-224617220107DELLA protein GAI
2zsi_B2e-224617220107DELLA protein GAI
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015957883.10.0DELLA protein GAIP-B
SwissprotQ6EI051e-106GAIPB_CUCMA; DELLA protein GAIP-B
TrEMBLA0A444ZSE40.0A0A444ZSE4_ARAHY; Uncharacterized protein
STRINGEOY010291e-109(Theobroma cacao)
STRINGPOPTR_0010s12080.11e-109(Populus trichocarpa)