PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

3D Structure |

Basic Information? help Back to Top

TF ID

Ahy012071

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

C2H2

Protein Properties

Length: 377aa MW: 41697.7 Da PI: 8.2491

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59546516	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.4e-05	3	25	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ Ahy012071 3 WVCERCSKGYAVQSDYKAHLKTC 25 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence Send to blast
KQWVCERCSK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDA CNMGRLRTES 60 HHNHNHNHQQ PPTPTACLSR TASSPSPSRS ETNFSTAPWQ PTSSTTTTTT PTSLVVIAKP 120 ITTTTEPPFF NNTNPTPILA TAETFLFKKS NTSNKLLHPN LDLQLSTTTT TTMMMNNNNS 180 IPNVDLTLSP KSDNNHHQQL QNQQHSTQLQ LSIGGTTSSD ISENNNKNDS SNRNSSPKES 240 INSSNENKHA TATSMALRVQ EQAREQLRLA MAEKAYAEEA RKQAKRQIEM AEQEFNNAKR 300 IRQQAQAEFD KACALKEHAM KKIXXDKLNH HANHVPFLQA TLSLQPPPVS ATAPPDENSL 360 VLSYMSSGIT TEGAGEV

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence Send to blast

KQWVCERCSK GYAVQSDYKA HLKTCGTRGH SCDCGRVFSR VESFIEHQDA CNMGRLRTES  60
HHNHNHNHQQ PPTPTACLSR TASSPSPSRS ETNFSTAPWQ PTSSTTTTTT PTSLVVIAKP  120
ITTTTEPPFF NNTNPTPILA TAETFLFKKS NTSNKLLHPN LDLQLSTTTT TTMMMNNNNS  180
IPNVDLTLSP KSDNNHHQQL QNQQHSTQLQ LSIGGTTSSD ISENNNKNDS SNRNSSPKES  240
INSSNENKHA TATSMALRVQ EQAREQLRLA MAEKAYAEEA RKQAKRQIEM AEQEFNNAKR  300
IRQQAQAEFD KACALKEHAM KKIXXDKLNH HANHVPFLQA TLSLQPPPVS ATAPPDENSL  360
VLSYMSSGIT TEGAGEV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5b3h_C	4e-17	1	52	5	56	Zinc finger protein JACKDAW
5b3h_F	4e-17	1	52	5	56	Zinc finger protein JACKDAW
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016203360.1	0.0	protein SHOOT GRAVITROPISM 5
Refseq	XP_025655543.1	0.0	zinc finger protein SHOOT GRAVITROPISM 5
TrEMBL	A0A444Z1L1	0.0	A0A444Z1L1_ARAHY; Uncharacterized protein
STRING	GLYMA09G30030.1	1e-118	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.2	5e-33	C2H2-like zinc finger protein