PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy010248 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NF-YA | ||||||||
Protein Properties | Length: 327aa MW: 35732.2 Da PI: 8.8444 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 93.6 | 2.3e-29 | 151 | 209 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp..ylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++I++RRq+Rak+ ++kl +k rkp y+heSRh hA+rRpRg+gGrF Ahy010248 151 DGPIYVNAKQYHGIIRRRQSRAKAVLDNKL-TKRRKPypYMHESRHLHAMRRPRGCGGRF 209 57****************************.888986337*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00521 | 4.6E-34 | 149 | 212 | IPR001289 | Nuclear transcription factor Y subunit A |
PROSITE profile | PS51152 | 34.122 | 150 | 212 | IPR001289 | Nuclear transcription factor Y subunit A |
Pfam | PF02045 | 3.7E-25 | 153 | 209 | IPR001289 | Nuclear transcription factor Y subunit A |
PRINTS | PR00616 | 4.2E-21 | 153 | 175 | IPR001289 | Nuclear transcription factor Y subunit A |
PRINTS | PR00616 | 4.2E-21 | 186 | 209 | IPR001289 | Nuclear transcription factor Y subunit A |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MAKQSVYPNK EHEGIAHNSS GPWWSLFGSQ YGESCGQMKP FSLEIPNYVD QIDTGKQSAR 60 GAENISGKGH TTQFTIFPDD CKMPCGAQKP QAAISLQSPL ADTNTRFELG FNQPMICAKY 120 PYMDQIYGLF SPYGPQISGR DNAATYMASD DGPIYVNAKQ YHGIIRRRQS RAKAVLDNKL 180 TKRRKPYPYM HESRHLHAMR RPRGCGGRFL NTKNSDDQND KSGNKVIKAL GEQLQSCGSQ 240 SSEVLQSEVG TLNSSKETNG SSPNISGSEV TSMYSRGGLD SFAISHLGSA VTVHSLVDMI 300 DGGRGMNMIM PPKWVAAVGG NCCNLNA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4awl_A | 2e-16 | 153 | 216 | 4 | 65 | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 165 | 184 | RRRQSRAKAVLDNKLTKRRK |
2 | 165 | 185 | RRRQSRAKAVLDNKLTKRRKP |
3 | 166 | 185 | RRQSRAKAVLDNKLTKRRKP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025624295.1 | 0.0 | nuclear transcription factor Y subunit A-10 isoform X1 | ||||
Refseq | XP_025624296.1 | 0.0 | nuclear transcription factor Y subunit A-10 isoform X2 | ||||
Refseq | XP_025624297.1 | 0.0 | nuclear transcription factor Y subunit A-10 isoform X2 | ||||
TrEMBL | A0A445B2H4 | 0.0 | A0A445B2H4_ARAHY; Uncharacterized protein | ||||
STRING | XP_007162983.1 | 1e-164 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 7e-57 | nuclear factor Y, subunit A10 |