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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy008999 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | VOZ | ||||||||
Protein Properties | Length: 450aa MW: 50686.8 Da PI: 5.3622 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 411.6 | 1.5e-126 | 201 | 418 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsl 100 pppsaflgpkc+lwdc+rpaqg + +qdycss h+ la neglpgttp+lrp+gi++kdg+lfaal ak+qgkevgip+cegaa++kspw+a+elfdls+ Ahy008999 201 PPPSAFLGPKCSLWDCFRPAQGLQICQDYCSSGHELLANNEGLPGTTPILRPGGIGVKDGPLFAALLAKTQGKEVGIPKCEGAASTKSPWKAPELFDLSF 300 89************************************************************************************************** PP VOZ 101 legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvde.kksakgk 199 leget+rewlffd+prraf sgnrkqrslpdy+grgwhesrkqvmke+gg+krsyymdpqp+s++ewhlyeyein++d+lalyrlelk vd+ kks+k+k Ahy008999 301 LEGETLREWLFFDQPRRAFVSGNRKQRSLPDYNGRGWHESRKQVMKEHGGHKRSYYMDPQPLSYLEWHLYEYEINNQDSLALYRLELKFVDNkKKSPKAK 400 *****************************************************************************************98625799*** PP VOZ 200 vskdsladlqkklgrlta 217 ++k+sladlq+k+g+l+a Ahy008999 401 LTKESLADLQNKMGKLSA 418 ****************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 450 aa Download sequence Send to blast |
MKDNLKNKCG SSSHQSMKEK EKHHLDKIQG IFINLQSSRK ENRYKDIVMF EEQMHQLLRE 60 WKAELESPAT SLAEGSLGSF PGELAQLLQE LEENDDAISP LEKPETLKTQ LHPHTVHDVN 120 YPSFHEKSFD DSHMLHDTFE GFGQFDGPAS TLQSDTSDMI TQLDSHTLVI EEGFDYGQFF 180 ENEAKQCEED TMPNVLPNIC PPPSAFLGPK CSLWDCFRPA QGLQICQDYC SSGHELLANN 240 EGLPGTTPIL RPGGIGVKDG PLFAALLAKT QGKEVGIPKC EGAASTKSPW KAPELFDLSF 300 LEGETLREWL FFDQPRRAFV SGNRKQRSLP DYNGRGWHES RKQVMKEHGG HKRSYYMDPQ 360 PLSYLEWHLY EYEINNQDSL ALYRLELKFV DNKKKSPKAK LTKESLADLQ NKMGKLSADV 420 LGDDGGTADG KIKAKSENGG SPEHETKNPE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015936296.1 | 0.0 | transcription factor VOZ1 | ||||
Refseq | XP_025614582.1 | 0.0 | transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 1e-147 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A445BXU8 | 0.0 | A0A445BXU8_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA06G43890.3 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-144 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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