PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy000856
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 326aa    MW: 36537 Da    PI: 7.9266
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-171a-Arachis_hypogaea-15730PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA352e-11244271532
       GATA   5 gttkTplWRrgpdgnktLCnaCGlyyrk 32 
                 +tkTp+WR+gp g+ktL naCG++yr 
  Ahy000856 244 EVTKTPQWREGPMGPKTLRNACGVRYRF 271
                68************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004017.9E-8234284IPR000679Zinc finger, GATA-type
SuperFamilySSF577164.18E-8237297No hitNo description
Gene3DG3DSA:3.30.50.102.8E-9238270IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.29E-9239286No hitNo description
PfamPF003202.4E-9244271IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MSEDVGNNMK DSWFFEKNFN GLSDEAFDDV FSFLDFPLED VEPNVVEEDW DAQFKRIEPC  60
YDVFSVSSTV LCSDKTQNEK PQLGGSFSGS SNEVSPIKQL DETAGLDVGK TILNQNSSLN  120
GKDLHQLQTY SPVSVFESSS TSSAENSNLD LPAIPVKRTR SKRQRASSFS PLFVIPSVPT  180
SPAWQIYEMK VDPESNLGTH HAGKSLNNTK KQRKKDLPVL SVHNDMKRFS SQEPVPTRKC  240
MHWEVTKTPQ WREGPMGPKT LRNACGVRYR FGRLFPEYRP AASPTFVPSV HSNCHKKVIE  300
MRSKGIQASL RNPLSAMSNL HGNFVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157162RTRSKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169708.10.0GATA transcription factor 11
RefseqXP_025671380.10.0GATA transcription factor 11
TrEMBLA0A444Y7R00.0A0A444Y7R0_ARAHY; Uncharacterized protein
STRINGGLYMA12G29730.11e-132(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.28e-45GATA transcription factor 11