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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aco031656.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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| Family |
C2H2 |
| Protein Properties |
Length: 165aa MW: 17222.8 Da PI: 7.5055 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco031656.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.6 | 0.00042 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C + F ++ L H++ H
Aco031656.1 80 FSCNYCRRKFYSSQALGGHQNAH 102
89******************997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 165 aa
Download sequence Send
to blast |
MDYYNMDETF QKDGEKKVGS EHAEAVTPQL GSKAEGEDSD EGTSVELDLI GSLGATDRPP 60
SSSSSSPPPP SPDREPPRVF SCNYCRRKFY SSQALGGHQN AHKHERSLAK RGAAAAAMML 120
PPPXRGACGS GRVARAPRVA LRAGPPEVGS AVGECGGNRT HVSA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | May play a role in the regulation of shoot development, downstream of photomorphogenic activation (Probable). Acts as negative regulator of abscisic acid (ABA) signaling during germination and early seedling development (PubMed:24808098). {ECO:0000269|PubMed:24808098, ECO:0000305|PubMed:8980531}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by white light in dark-grown seedlings. {ECO:0000269|PubMed:10794528}. |
