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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Aco029320.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family |
HD-ZIP |
Protein Properties |
Length: 167aa MW: 19180 Da PI: 9.4877 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Aco029320.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 62.6 | 5.8e-20 | 38 | 92 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tk+ql Le+ F ++++++ ++++eLA+kl+L+ rqV vWFqN+Ra+ k
Aco029320.1 38 RKKLRLTKDQLALLESSFVQHNTLNSSMKQELAHKLNLSPRQVEVWFQNKRARSK 92
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 107.9 | 7.2e-35 | 38 | 125 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
+kk+rl+k+q++lLE+sF ++++L+++ K+ela++L+l+prqv+vWFqn+RAR k+kq E++ye+Lk+++++l+een++L+++ eeLr
Aco029320.1 38 RKKLRLTKDQLALLESSFVQHNTLNSSMKQELAHKLNLSPRQVEVWFQNKRARSKLKQNEVNYEMLKKCCERLSEENQKLKEKLEELR 125
69************************************************************************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MINESVGNEN YASLCKSRSR SINNGVESGG EDGKGCTRKK LRLTKDQLAL LESSFVQHNT 60 LNSSMKQELA HKLNLSPRQV EVWFQNKRAR SKLKQNEVNY EMLKKCCERL SEENQKLKEK 120 LEELRLMRLK LPFYVQQYQN EHTLIMCPSC KLKGEDDALA SVKISQ*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |