 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco027010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
Nin-like |
| Protein Properties |
Length: 301aa MW: 32773.7 Da PI: 9.0917 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco027010.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 70.8 | 1.8e-22 | 32 | 77 | 3 | 48 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
++sl+++sk Fslpi++AA+ Lgvc++vLKriCR +GI+RWP+Rk
Aco027010.1 32 VKLSLDEISKLFSLPIAEAASILGVCTSVLKRICRDNGIARWPYRK 77
589******************************************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MASTSASETT APPQQQQQQQ QQPAAPHSQS KVKLSLDEIS KLFSLPIAEA ASILGVCTSV 60
LKRICRDNGI ARWPYRKFLV GKTFEDIKRD AEREKTKESA DSSKKTKQKA DATKAMPANS 120
VGSSSTFEDQ NNSKSQSGVP THSHILQQGV RFAQGVSPNN MLHLSQIRNI PTFMDEFKYG 180
FPTRGLSSLS NKWWGSGNSD SSPLKSSAVK DESQESCELS NETSKCTMDD MADSGTEDSA 240
ATSVPSAVLC SLRRKALEDG RGLLKDGACN GCELHKLNKR QRLVLAQVFG SSLPDKWKDR 300
*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KM665062 | 1e-161 | KM665062.1 Ananas bracteatus clone 50155b microsatellite sequence. |
