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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aco024127.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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| Family |
HD-ZIP |
| Protein Properties |
Length: 246aa MW: 27242.5 Da PI: 5.7895 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco024127.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.8 | 9e-19 | 37 | 90 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++f+++q++ Le+ Fe + ++ +++++LA lgL+ rqV +WFqN+Ra++k
Aco024127.1 37 KKRRFSEQQVRSLETTFEVQAKLEPKKKAQLALDLGLQPRQVAIWFQNKRARWK 90
6679*************************************************9 PP
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| 2 | HD-ZIP_I/II | 115.8 | 2.5e-37 | 37 | 128 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrr+s++qv++LE++Fe + kLep++K++la +Lglqprqva+WFqn+RAR+k+kqlE++++aL++ +dal + e+L++e++ L ++l++
Aco024127.1 37 KKRRFSEQQVRSLETTFEVQAKLEPKKKAQLALDLGLQPRQVAIWFQNKRARWKSKQLEHEFAALRADHDALFAAVEALRREKQILLRQLQK 128
9*************************************************************************************999986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 246 aa
Download sequence Send
to blast |
MAHSGELFLG EAAGVADPFA SMNGFAGKRG RRGESTKKRR FSEQQVRSLE TTFEVQAKLE 60
PKKKAQLALD LGLQPRQVAI WFQNKRARWK SKQLEHEFAA LRADHDALFA AVEALRREKQ 120
ILLRQLQKLK ELLEKQTEEN EKDGGSSNGG NRAIAASREG SANENVLNSE HGEIKLSCVA 180
QEEDAGLLYM GEPEVSGCLT SIGEQQQQQC GFNCSSSPEN CTTTTTTTTS EWWEFWPLTE 240
LNPVA*
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