PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco024095.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 466aa    MW: 51213.6 Da    PI: 5.5989
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco024095.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.88.8e-1931611128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkya...tgkrknra............. 77 
                  +p+G+++ P++e lv   L+k+v+g++    ++++i+e+d+y ++P +L +    ++++ +ew+fFs  + k +    g r   +             
  Aco024095.1   3 MPAGCKYAPKEEVLVGIVLRKRVRGEPpdPAAADCIREADVYGHHPAQLTAlfpPTNQGPHEWFFFSWCKVKGKrarCGGRDDHQearrgdgfkrgrk 100
                  699************************76455578**************854665566778*****98877666233222222224556788888888 PP

          NAM  78 .........tksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                           +  g W++t   k+v++    + g+  t+ ++   + r++k +ktdW+m+ey l
  Aco024095.1 101 ersvrdaggAGIGQWRSTQAAKRVIQ--IDVSGCVVTIGYHqnfEFRDSKKQKTDWLMEEYGL 161
                  88888888878999*********999..556777778887744334788889*********75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-212186IPR003441NAC domain
PROSITE profilePS5100525.3943186IPR003441NAC domain
PfamPF023651.5E-114160IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MAMPAGCKYA PKEEVLVGIV LRKRVRGEPP DPAAADCIRE ADVYGHHPAQ LTALFPPTNQ  60
GPHEWFFFSW CKVKGKRARC GGRDDHQEAR RGDGFKRGRK ERSVRDAGGA GIGQWRSTQA  120
AKRVIQIDVS GCVVTIGYHQ NFEFRDSKKQ KTDWLMEEYG LLPSSGGAEA AGCDDKEQVI  180
CKIYKTPAAR RAEAKQSVAP ATLPPRVSLQ LCPSQPELPQ QRRPRLQPQL SPPPWPALPP  240
LLPASSVPDV SQPQLSPTSW SVGTPLWPPQ RELMVQPLIS MQLDVPWHDS MMAARDRTPF  300
CPLDRDRPDV PHGAVVYPEL YEAVATYVGG GQMRTTSQIP QCTTTDVSDH HTYDGSVLFQ  360
HSDRQQQQQQ QHTEPIASAA AQVEGSTTPD DQSAAVGAEG EAEKDLGAFL QSVPTEQPPV  420
SSDHARYLDE SLYMVHDGSL FAEMPTIDIG VDDYLISDGL DFLDI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020101434.10.0uncharacterized protein LOC109719270
TrEMBLA0A199VKQ94e-72A0A199VKQ9_ANACO; Putative apyrase 1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP114741834
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-11vascular related NAC-domain protein 7