 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Aco020633.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 211aa MW: 23464.3 Da PI: 8.7491 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco020633.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.9 | 8.4e-19 | 56 | 110 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
Aco020633.1 56 RKKLRLSKEQSAYLEESFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTK 110
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 129.1 | 1.8e-41 | 56 | 146 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rlskeq++ LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +lk
Aco020633.1 56 RKKLRLSKEQSAYLEESFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELR-ALK 146
69*************************************************************************************9.665 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MAPSESSSSE EEEEMVEGAG APTSSSPPPN SSVSFQMELS GRRGRGSDEE ENGSPRKKLR 60
LSKEQSAYLE ESFKEHSTLN PKQKIALAKQ LNLRPRQVEV WFQNRRARTK LKQTEVDCEY 120
LKRCCETLTE ENRRLHKELA ELRALKTASN PFYMHLPATT LSMCPSCERT TSSSSASRPS 180
PFVSFFSKPP FHPLAAAHSM ASPRQPSATS *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 112 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM665940 | 1e-174 | KM665940.1 Ananas bracteatus clone 51128b microsatellite sequence. |
