 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Aco018092.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
Dof |
| Protein Properties |
Length: 214aa MW: 22623.1 Da PI: 8.8485 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco018092.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 69.5 | 5.1e-22 | 87 | 128 | 5 | 45 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrry.WtkGGa 45
l+cprC s++tkfCy+nny+++qPr+fCk+Cr+ t+GGa
Aco018092.1 87 PLPCPRCRSRETKFCYFNNYNVNQPRHFCKSCRQLtGTAGGA 128
679*****************************9962578886 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MGPGEAAAAA AAAAAAAAAP VIKLFGAVIH DRPPKEEEED DDDDAASASA AAAAAAARPP 60
PPSSSAESGG GGGGGGGGAA AAGVSAPLPC PRCRSRETKF CYFNNYNVNQ PRHFCKSCRQ 120
LTGTAGGAPA TSRRRRPPQG PSPPHPSPDR CFPRPIAPRF RRPPLRLTKI HDEDEDEDDH 180
HHHHHHHQQR LAIDYHFKES VHHPPKKRKK EKT*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 204 | 210 | PKKRKKE |
| 2 | 205 | 209 | KKRKK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AJ969263 | 9e-55 | AJ969263.1 Hordeum vulgare dof17 gene for dof zinc finger protein 17, cultivated variety Bomi. |
| GenBank | AK360617 | 9e-55 | AK360617.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1121P17. |
| GenBank | AK365055 | 9e-55 | AK365055.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2030J14. |
| GenBank | HG670306 | 9e-55 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
