 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco014364.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 276aa MW: 31505.5 Da PI: 4.7906 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco014364.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.5 | 1.2e-19 | 70 | 122 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++++++q+e Le+ Fe ++ + e++ eLAk+lgL+ +qV +WFqNrRa++k
Aco014364.1 70 KRRLSDDQIEFLERSFEVENRLEPERKIELAKELGLEPKQVAIWFQNRRARWK 122
5589************************************************9 PP
|
| 2 | HD-ZIP_I/II | 125.5 | 2.4e-40 | 69 | 158 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrls++q+++LE+sFe e++LeperK ela+eLgl+p+qva+WFqnrRAR+k kqlEkdy+aLk +yd+lk + e L ke+e+L++e+
Aco014364.1 69 KKRRLSDDQIEFLERSFEVENRLEPERKIELAKELGLEPKQVAIWFQNRRARWKIKQLEKDYDALKCSYDSLKVNYEGLCKEKEDLQAEV 158
9**************************************************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MMAKEMMIYK GSNTATLLPH EGVSAEGFEA LFSPVGFYGS RAMINFDETP QRKRFSDEDS 60
DEFTHLPLKK RRLSDDQIEF LERSFEVENR LEPERKIELA KELGLEPKQV AIWFQNRRAR 120
WKIKQLEKDY DALKCSYDSL KVNYEGLCKE KEDLQAEVLS LAKKLGVENM FSLSTQSFEF 180
EKTNKISQKP KKILVSSEGG GSDDQNLMVS KPEDLISSNS VVFNSCESPQ HTESSHCMEK 240
GNSVLSDPTV DSSNLQGYSC KYEIPFVDQD FLFWP*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 51 | 71 | RKRFSDEDSDEFTHLPLKKRR |
| 2 | 116 | 124 | RRARWKIKQ |
