 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco012965.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
HB-other |
| Protein Properties |
Length: 373aa MW: 39355.9 Da PI: 6.5041 |
| Description |
HB-other family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco012965.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 66.8 | 2.9e-21 | 126 | 181 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ +++t++q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
Aco012965.1 126 KKRYHRHTAHQIQEMETLFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMK 181
688999***********************************************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MYGDCQVMSS MVGGGGGGNV VSPDSLFSSP IRNPSLGFMT NMPFHAFSAA LVPKEEGVMV 60
MGRGGAAKEE EVESGGSGSG HLDGLGSGSG HVDGLSCGEE HDNEHQKLQQ QHQQQQQQTP 120
SGSAKKKRYH RHTAHQIQEM ETLFKECPHP DDKQRLKLSQ ELGLKPRQVK FWFQNRRTQM 180
KAQQDRADNV VLRAENDSLK NENFRXPILI YHACMHGHVE CMQASSNSSQ NVELLLQESN 240
THPSGGSLVV YATVDVGAVQ VAMSGEDPSY IPLLPMGFVL SPSPPPPSRT SSATPEGDGS 300
GASAATAAAV APGCLLTISM QVLASAVPSA KLNLSSVTAV NHHLCNAVRQ ISAALGGPPQ 360
PEPAGTAAPP DP*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
