PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco012835.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 343aa    MW: 36712.7 Da    PI: 8.5934
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco012835.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.8e-18211261155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  + y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a++ ++g
  Aco012835.1 211 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 261
                  68*****998.**********843...6**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF059106.2E-171124IPR008586Protein of unknown function DUF868, plant
PfamPF008471.5E-12211261IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-21212270IPR016177DNA-binding domain
SMARTSM003806.3E-38212275IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-32212270IPR001471AP2/ERF domain
PROSITE profilePS5103223.248212269IPR001471AP2/ERF domain
CDDcd000181.77E-29213271No hitNo description
PRINTSPR003671.5E-10213224IPR001471AP2/ERF domain
PRINTSPR003671.5E-10235251IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MLIMVDGNCV LNVPRLRWAF RGSETVSSAA AEGGGRIRVS WDLHNWLFRL PDDSAPPPTA  60
FGDAGDAVFV FRFEQDGDGD TNENCGTGEG HFQKKGGDFA ERGYFGKRNR KNWSESGGCN  120
NSSNSSSRGR RKKSLLKATS SSSLSSSNST SSTPTTTSPC PNAPSPPAEK SGSGLKKGGK  180
NSCKREADAV GGGGGGGGES KQKRSKEGKH PVYRGVRMRN WGKWVSEIRE PRKKSRIWLG  240
TFPTAEMAAR AHDVAALTIK GQSAHLNFPE LAPALPRPAT ASPKDIQAAA ALAAAFPAAG  300
DDLPDLLLDL RDGFWFPSSW EDEEDGGGGE FRFEEPLLWE YC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-172092701173Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00312DAPTransfer from AT2G44940Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020084972.10.0ethylene-responsive transcription factor ABR1-like
TrEMBLA0A199V4007e-78A0A199V400_ANACO; Ethylene-responsive transcription factor ERF034
STRINGXP_008796155.12e-55(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-44ERF family protein