PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aco012631.1

Organism

Ananas comosus

Taxonomic ID

4615

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas

Family

bZIP

Protein Properties

Length: 276aa MW: 29925.5 Da PI: 6.0682

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aco012631.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.8	3.2e-15	227	269	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk Aco012631.1 227 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLKK 269 79***************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.8E-14	218	270	No hit	No description
SMART	SM00338	2.1E-8	223	274	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	225	270	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.6E-13	227	270	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.96E-23	227	272	No hit	No description
SuperFamily	SSF57959	5.06E-11	227	270	No hit	No description
PROSITE pattern	PS00036	0	230	245	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence Send to blast
MALQGGGGGG GGGPSQIESL ARQGSLYNLT LNEVESHLGE PLHSMNLDEL LKSVLPIEMN 60 QSLPAMDESS TSEHPLGPGL LRQGSITMPQ GLSKKTVDEV WRDIQQGGKK GSEEGHKGRR 120 ERQTTLGEMT LEDFLVKAGV VTNELIANVG QGGSADPMAG QQDFTQGGHW YQQGVMGGYP 180 VLNASYSEGG QMSISSQMMG ALSDSQMPGR KRAAAPSEDV EDKLVERRQK RMIKNRESAA 240 RSRARKQAYT NELENKVSRL EEENERLKKQ KVDVF*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020101113.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_020101114.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	4e-75	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A199V7L0	0.0	A0A199V7L0_ANACO; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_008792462.1	1e-107	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-72	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Aco012631.1

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]