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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco011121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | bHLH | ||||||||
Protein Properties | Length: 151aa MW: 16442 Da PI: 5.0375 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.2 | 0.00033 | 21 | 43 | 30 | 54 |
C...TTS-STCHHHHHHHHHHHHHH CS HLH 30 askapskKlsKaeiLekAveYIksL 54 + ++s l+Ka+i A++YI +L Aco011121.1 21 L--TNSHALNKASIILDATKYIEEL 43 2..34555**************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.02E-5 | 10 | 56 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.9E-6 | 18 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence Send to blast |
MVSREHKKAG LHEKLQLLRS LTNSHALNKA SIILDATKYI EELKEKVVKL NQEVACAQNI 60 VIEDPLPMVT VETLERGFLI NVFSDKSSPG LLVSILEAFE ELGLEVMEAR ASCTDTFRLE 120 AVGAENLAEG VDAHVVKQAV LQSIKNCSGN * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020087299.1 | 1e-105 | transcription factor bHLH61-like isoform X2 | ||||
TrEMBL | A0A199WB70 | 2e-84 | A0A199WB70_ANACO; Uncharacterized protein | ||||
STRING | XP_008782614.1 | 7e-83 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1393 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10570.1 | 2e-09 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Aco011121.1 |