PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco011077.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 293aa    MW: 30548.8 Da    PI: 8.0875
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco011077.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.24.1e-085177232
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfs 32
                 +y+GVr+++ +g+WvAeIr+p++   r+r++
  Aco011077.1 51 RYRGVRQRS-WGKWVAEIREPRK---RTRIW 77
                 59****999.**********954...47776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.32E-75179IPR016177DNA-binding domain
PROSITE profilePS5103212.3785179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-115179IPR001471AP2/ERF domain
SMARTSM003801.2E-95193IPR001471AP2/ERF domain
CDDcd000187.71E-135188No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MESEHESQEP IEQYHPLPSN NPSPSGRKEG KGGKGKGKGK GKGGPDNGKF RYRGVRQRSW  60
GKWVAEIREP RKRTRIWHGP RAHLNLQIIA PSSSSSNSST SLSPSPSSSS SPSVVGASTS  120
ASSSSPSSYS ASSSSSSTLR PILPRPSGFP FQLFHPPPPP PPTNPTYTTN LNPIILYPHP  180
STATIGGNPL TANPIFPHAV TAPTETPPPP PQEPSYVAGV NCEEITSLAG SVSSSLSLSC  240
PSVAAPASAA AEEAPQPPPL PVAASPVWGY DDYVAAAASC LWDDADPYLF DL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020086790.10.0ethylene-responsive transcription factor ABI4-like
TrEMBLA0A199VAM19e-67A0A199VAM1_ANACO; Ethylene-responsive transcription factor ABI4
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.18e-17ERF family protein