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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Aco011052.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family |
Trihelix |
Protein Properties |
Length: 204aa MW: 24605.9 Da PI: 9.8295 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Aco011052.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 48.5 | 2.3e-15 | 3 | 61 | 24 | 86 |
trihelix 24 gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+k++kplWee s+++r +gf r+++qCk+kw+nl +r+k +++ +++ +++p+ ++++
Aco011052.1 3 TKRNKPLWEEMSNRLRCKGFFRTAEQCKSKWKNLVTRFKGCEALQQDA----NKQFPFHEEMR 61
5789****************************************9985....56799999996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MATKRNKPLW EEMSNRLRCK GFFRTAEQCK SKWKNLVTRF KGCEALQQDA NKQFPFHEEM 60 RRIFSKRMER VLSSDTNKEG NEEEEEEEEK MDERSKRKGG VVKKKKKRKE LEEEVAVALK 120 EFVRRQAERE AWWVEAAEAR EAERRVKEEE WRSAMAALSE ERVAMERRWR EREEERRSRE 180 EVRAERRHAL IMSLLNKLAN EEA*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 102 | 108 | KKKKKRK |
2 | 103 | 108 | KKKKRK |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may play a role in the induction of CAM4 in response to pathogen and salt. {ECO:0000269|PubMed:15310827}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salt and infection with the bacterial pathogen P.syringae pv tomato. {ECO:0000269|PubMed:15310827}. |