PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco010211.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family TALE
Protein Properties Length: 601aa    MW: 64439.3 Da    PI: 7.3703
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco010211.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.82.1e-094314632254
                  SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  ++yp+ +++  LA+++gL+ +qV++WF N R +
  Aco010211.1 431 HPYPTDTDKHMLAAQTGLSRNQVSNWFINARVR 463
                  89*****************************88 PP
2BELL98.26.7e-32283352372
         BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                   e q+ k kLl ++eeV++rYkqy++q+q+v ssFe vagl sa+pY+slAlk+iS+hFr+Lk ai +q+
  Aco010211.1 283 PEFQQVKLKLLFMQEEVCRRYKQYHQQVQMVGSSFESVAGLSSATPYASLALKTISKHFRSLKSAILNQL 352
                  688999*************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.3E-41201350IPR006563POX domain
PfamPF075261.7E-38206348IPR006563POX domain
PROSITE profilePS5007111.839404467IPR001356Homeobox domain
CDDcd000861.29E-12407468No hitNo description
SMARTSM003891.9E-9407471IPR001356Homeobox domain
SuperFamilySSF466893.85E-17409474IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-27410471IPR009057Homeodomain-like
PfamPF059201.7E-18424463IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    Send to blast
MASSFSREGP HVAQQTRRDK LRFAPAPPHH AAPHFDPAMF ALSFPLGLGD EGFEPSNGPR  60
SRSGDFVSGV NGYVDFAPFP SSQPYHGGAL HEVIAAPSPS SLGSQTLELP SVVPPNLPEG  120
SGTDLMLPHQ WSGDYAYAAA RGLSLTLSPS PLTELPAPPP PQYEDRLGHA KCSIGGGVAF  180
HGLANSPAET RRAAGPLGPF TGYAAVLRSS KFLRPAQQLL DEICSAVTGL GLAKPCGGGD  240
GQNLCDRVSG GGDASDMLSP LHNSSERGNG GGGSGTCAVQ HRPEFQQVKL KLLFMQEEVC  300
RRYKQYHQQV QMVGSSFESV AGLSSATPYA SLALKTISKH FRSLKSAILN QLQNISKVLG  360
EEFMSSPSTS KGEMFSSSRL KHTEQGNHKQ KVGERSLGFV EHNQPVWRPQ RGLPERAVAV  420
LRNWLFDHFL HPYPTDTDKH MLAAQTGLSR NQVSNWFINA RVRLWKPMVE EIHMLETKSM  480
SGCALDSASA SASASASRND LRPTTYNSGG PLNEQSSEES NKLSESASAE APFKDGNMPS  540
AEAWHPDKPL RMQECGIRES TDGTLMSFMA YPSGMDIGGF GAVSLTLGLR HEAIWKPNGA  600
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A6e-15413471563Homeobox protein Meis2
4xrm_B6e-15413471563Homeobox protein Meis2
4xrs_A6e-15413470158Homeobox protein Meis1
4xrs_B6e-15413470158Homeobox protein Meis1
5bng_A5e-15413471159Homeobox protein Meis2
5bng_B5e-15413471159Homeobox protein Meis2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020115021.10.0BEL1-like homeodomain protein 9
TrEMBLA0A199URV80.0A0A199URV8_ANACO; BEL1-like homeodomain protein 8
STRINGXP_008787379.11e-173(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16049811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.19e-81TALE family protein