PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco008553.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bHLH
Protein Properties Length: 367aa    MW: 40664.8 Da    PI: 6.8662
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco008553.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-102923321055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Aco008553.1 292 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 332
                  9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.224282331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-14282348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-12287342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11288337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.74E-11291336No hitNo description
PfamPF000101.2E-7292332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MSREEMELTA NWSSYNGSST PAEESEIVAQ FISTYPFQNE QDHRDLGFGA PPMYWPDHHN  60
ASNSYYCNGN ANPNLHYWSQ GDSNSSSVST STGTCCYFVP HSDYESYYVN TNSSSPMIFN  120
LVEEQRKNRS LQVVPNPSLR EQTGVNAETS SDDHGDSSMN IGLSDQITHP KRKFLSNRND  180
KVVDQSKFEN PIESTKKKSK ASTKVQKCAK KMQSKRAQKN VKSGDEEECN AAVNGQISSS  240
CYSSDNESIN SQEMNGGGSA SSSSKGSPAL NLNAKTRAGR GSATDPQSLY ARKRRERINE  300
RLRILQNLVP NGTKVDISTM LEEAVQYVKF LQLQIKLLSS DELWMYAPIA YNGINIGLDL  360
KISPPQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020095729.10.0transcription factor bHLH84-like
TrEMBLA0A2H3Y2X41e-114A0A2H3Y2X4_PHODC; transcription factor bHLH84-like
STRINGXP_008792628.11e-115(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43103270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-44bHLH family protein