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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aco007831.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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| Family |
E2F/DP |
| Protein Properties |
Length: 472aa MW: 52276.2 Da PI: 4.6611 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco007831.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 86.3 | 2.3e-27 | 146 | 211 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL+llt+kf++ll+++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg
Aco007831.1 146 RYDSSLGLLTKKFINLLKHAQDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 211
6899******************************...99..****************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009733 | Biological Process | response to auxin |
| GO:0010090 | Biological Process | trichome morphogenesis |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0051302 | Biological Process | regulation of cell division |
| GO:0051446 | Biological Process | positive regulation of meiotic cell cycle |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MSGGGRAAGN QQSGQKIFQP LRRHLPFPSA RPPFPAPDEY HRFSAADGRR VAAAADDMAE 60
AVVIKTPLKR KADQEENEAA ESSEWTTSPG YAEAVSSPLL TPVSGKGGRV HGKSKAPKYN 120
KAGPHTPMSN AGSPSSNPLT PVGTCRYDSS LGLLTKKFIN LLKHAQDGIL DLNKAAETLE 180
VQKRRIYDIT NVLEGIGLIE KKLKNRIRWK GLDDSRPEVN NDFSILQEEV ENLTLQEQNV 240
DERISEMREK LRELTEDDNN QKWLYVTEDD IKGLPCFQNE TLIAIKAPHG TTLEVPDPDE 300
AGDYLQRRYR IVLRSTMGPI DVYLVSQFEE KFEEMSGVET PPRNTQMPNS RPAESCKAVV 360
AAESSRGKET ELNVQDGQRI ALDINASQDY LGGMTKIVPS DDDTDADYWL LSDSVASITE 420
IWKTAPEQQI DEIDRFSMDE YFAGEVSTPR PQNQQESGVI DAPSNTDATQ R*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The binding of retinoblastoma-related proteins represses transactivation. Regulates gene expression both positively and negatively. Activates the expression of E2FB. Involved in the control of cell-cycle progression from G1 to S phase. Stimulates cell proliferation and delays differentiation. {ECO:0000269|PubMed:11669580, ECO:0000269|PubMed:11786543, ECO:0000269|PubMed:11862494, ECO:0000269|PubMed:11889041, ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:12913157, ECO:0000269|PubMed:15377755, ECO:0000269|PubMed:16514015, ECO:0000269|PubMed:19662336}. |
