PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco007650.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 374aa    MW: 40044.4 Da    PI: 9.2802
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco007650.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-19183234256
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr++  +g+WvAeIr p+++  ++r +lg+f+tae+Aa a+++ + kl+ge
  Aco007650.1 183 LYRGVRQRQ-WGKWVAEIRLPRSR--SRRLWLGTFDTAEDAALAYDREAFKLRGE 234
                  59****999.**********9654..5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.86E-24182241No hitNo description
SuperFamilySSF541711.37E-22183241IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-31183241IPR001471AP2/ERF domain
PROSITE profilePS5103223.459183241IPR001471AP2/ERF domain
SMARTSM003801.9E-35183247IPR001471AP2/ERF domain
PfamPF008471.7E-12184234IPR001471AP2/ERF domain
PRINTSPR003671.3E-10184195IPR001471AP2/ERF domain
PRINTSPR003671.3E-10207223IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MREESRRWAR KGQRAHARSI ASWTAEREGP RKSSEDCNGD GDGDGDSVRG RRVKGKAVLD  60
IPTVAHGAEK LESSPRPSKK IKSPDHDLHR PNLICRSRSI LFPSLPISPF AFEAPRSDSD  120
ARALLQQQMI SFGAVNSPPF HSGLVSDQLV LLRRWSEALN LSPRGGAGLM QQFGTPPRPP  180
QKLYRGVRQR QWGKWVAEIR LPRSRSRRLW LGTFDTAEDA ALAYDREAFK LRGESARLNF  240
PGLFLCSASA PSSSLSSSSA PAPSAPSTVA VEGRAESVGG TAETDGGGSD QLAWGEGEVE  300
AWFSAWGPGS SVWDDVDWAN RLLRQSRLAA AAESESVRSD AAPAASATTA AAAAASQDIN  360
SASSSDPTDT VTT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-20182241463ATERF1
3gcc_A2e-20182241463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020094046.10.0ethylene-responsive transcription factor ERF054-like
TrEMBLA0A199V7850.0A0A199V785_ANACO; Ethylene-responsive transcription factor ERF054
STRINGLPERR04G15780.11e-53(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.13e-34ERF family protein