 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco006716.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
ERF |
| Protein Properties |
Length: 233aa MW: 25881.8 Da PI: 4.6363 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco006716.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 53.4 | 6.2e-17 | 74 | 124 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +grWvAeIrdp +r r +lg++g+ae Aa+a+ aa+++++ e
Aco006716.1 74 AYRGVRRRS-SGRWVAEIRDP----IRrVRSWLGTYGSAEAAAEAYRAAAERFRAE 124
69****888.8*********7....246999*********************9975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MAIRKLRVVF SDPDATDSSS GEEEEEEEED DDEIERRRRR RKKRKRVVYE IPMRSKTLEV 60
EKKKMKGMGS RSSAYRGVRR RSSGRWVAEI RDPIRRVRSW LGTYGSAEAA AEAYRAAAER 120
FRAEQKIGGG GAASPSAASF AAASPSSVLD TSAAERRDPP PEAEEEGRRR SIAELFEIPE 180
MELGAMGAEE EEGFLWGELC GELLIGLDDL PLLDQQLDGC DFSFLDTLDA ST*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 35 | 43 | RRRRRRKKR |
| 2 | 37 | 45 | RRRRKKRKR |
| 3 | 38 | 43 | RRRKKR |
| 4 | 38 | 44 | RRRKKRK |
| 5 | 39 | 45 | RRKKRKR |
| 6 | 40 | 45 | RKKRKR |
| 7 | 43 | 65 | RKRVVYEIPMRSKTLEVEKKKMK |
