 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco005438.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
GATA |
| Protein Properties |
Length: 203aa MW: 22056.8 Da PI: 9.7624 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco005438.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 56.5 | 3.8e-18 | 46 | 79 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C+ Cgt+ TplWR+gp g+k+LCnaCG++yrkk+
Aco005438.1 46 CVDCGTSITPLWRSGPCGPKSLCNACGIRYRKKR 79
********************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 203 aa
Download sequence Send
to blast |
MAGYTRTSVV RRYTRRRKEE EEEEEPKEEE KVAETRTAKI EASRVCVDCG TSITPLWRSG 60
PCGPKSLCNA CGIRYRKKRK GGGGGGGGSK GDDNGDAANL SPTPINSPAT ASTTSTSAHE 120
TREASAQVWR EEELRRLQKE KQEKVLLLLM QQQQQQQKQK QKLMLRSANA EDRGRGGAGG 180
AKEVAEAALL LMSLSSGFFV PS*
|
