 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aco005327.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
ERF |
| Protein Properties |
Length: 259aa MW: 28572.3 Da PI: 8.0364 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco005327.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 57 | 4.9e-18 | 105 | 157 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
s ykGVr+++ +g+++AeIrd s +g +r++lg+f taeeAa a + a+++++g+
Aco005327.1 105 SNYKGVRRRP-WGKFAAEIRDLSRRG--ARVWLGTFETAEEAALAFDVAALRMRGP 157
57********.**********53333..**************************95 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MAIQLQTLEA DETILETIWS SFITGNAPKC SQPGSERGEA QLAMLERLPS LGRWISMGAE 60
SWEELLGGII SSDGCRSASP TNSATQHCLS PTAECPKAEK VASSSNYKGV RRRPWGKFAA 120
EIRDLSRRGA RVWLGTFETA EEAALAFDVA ALRMRGPRTR LNFPLEVVES ASSEATWIEK 180
PQRSASSTCP ACPLYGFTVT SQKSKRRRKR KWNYTEEVVH EVPAQKRTSC IQEIVSTQTD 240
VVVLQDLGSE YLERLLSS*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 2gcc_A | 3e-26 | 102 | 167 | 1 | 66 | ATERF1 |
| 3gcc_A | 3e-26 | 102 | 167 | 1 | 66 | ATERF1 |
