 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Aco002761.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 314aa MW: 34623 Da PI: 4.6446 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco002761.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 60.2 | 3.2e-19 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe ++++ e++++LA++lgL+ rqV vWFqNrRa++k
Aco002761.1 65 KKRRLSVEQVRALEKNFEVENKLEPERKQRLAQELGLQPRQVAVWFQNRRARWK 118
456899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.9 | 2e-41 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls eqv++LE++Fe e+kLeperK++la+eLglqprqvavWFqnrRAR+ktk+lE+d++aLk++ydal+ + ++L++++e+L++el++
Aco002761.1 64 EKKRRLSVEQVRALEKNFEVENKLEPERKQRLAQELGLQPRQVAVWFQNRRARWKTKRLERDFAALKASYDALRLDYDALHRDKEKLQAELDA 156
69**************************************************************************************99975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0030308 | Biological Process | negative regulation of cell growth |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MKRHASSDQL ISLCPPGEEK GLYGRGFSLL EGMEEDEYGD EEMISSIGGN GGGSGGGGGG 60
GGGEKKRRLS VEQVRALEKN FEVENKLEPE RKQRLAQELG LQPRQVAVWF QNRRARWKTK 120
RLERDFAALK ASYDALRLDY DALHRDKEKL QAELDALKGK LGQPNISFSS VKEEEQEEEE 180
EEEEEEEELE PVAAAESETK AAAAPALESD SSAVLSDELL PPAASAAAFE NSSQNCFATA 240
SSPLVDSRAH KGGGFYFYQQ HQHQHQHQHQ QQQYHLMMKV EEGAFFGGEE PCSSLFSEEQ 300
ARGTTRITGT RSS*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
