PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco002673.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 217aa    MW: 22927.2 Da    PI: 4.984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco002673.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-183887255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Aco002673.1 38 QYRGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 87
                 7*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.82E-193799No hitNo description
PfamPF008473.6E-113887IPR001471AP2/ERF domain
SMARTSM003808.3E-3338103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-283898IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-173897IPR016177DNA-binding domain
PROSITE profilePS5103221.6013897IPR001471AP2/ERF domain
PRINTSPR003674.4E-93950IPR001471AP2/ERF domain
PRINTSPR003674.4E-96177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MGGLNNSSSS SSSSSSSNSN NISSSSSSGS SSSCRRKQYR GVRMRSWGSW VSEIRAPNQK  60
TRIWLGSYST PEAAARAYDA ALLCLKGASS SASLNFPAVS LRYHRLLPAA STTALSPKSI  120
QRVAAAAAAA ADAAFSLPSP QTSDGNAVIE NRPSERTLDA DVDGAGNDPL IELEAFFQSP  180
KCMDYMLNPC AFFAGSDQFT QECCDEEDEI SLWSFC*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1352063e-33AC135206.3 Oryza sativa Japonica Group chromosome 3 clone OJ1041F02, complete sequence.
GenBankAP0149593e-33AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBankCP0126113e-33CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020089991.11e-155ethylene-responsive transcription factor ERF014
TrEMBLA0A199UQV21e-116A0A199UQV2_ANACO; Ethylene-responsive transcription factor ERF012
STRINGGSMUA_Achr10P25270_0018e-47(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31973469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.13e-30ERF family protein