|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Aco001232.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
Family |
Trihelix |
Protein Properties |
Length: 311aa MW: 35373.5 Da PI: 4.9675 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Aco001232.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 59.9 | 6.1e-19 | 43 | 125 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ e+ +Li+a+++++ +l+rg+lk+++Weev++ + ++ gfer + +qC++k+e+l+kry++++ + s +pyf++++
Aco001232.1 43 WSHLETVHLIDAYEQRWYALKRGQLKAQQWEEVAAEVaARCGFERpskTGTQCRHKIEKLRKRYRAERLRPVA------SPWPYFERID 125
***********************************9977789998766889**************98877765......579***9997 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MPPPNSNPNP NPNPNPNPSP ERRPLPPPPP APATRRLGPG QPWSHLETVH LIDAYEQRWY 60 ALKRGQLKAQ QWEEVAAEVA ARCGFERPSK TGTQCRHKIE KLRKRYRAER LRPVASPWPY 120 FERIDRMERG PMPISVRPPP SRLPQALPIA SSDEENDDAE DDDGAGEDDG VRIASNTRSI 180 NGILRESSWG FPRASANPPP LPPRKLSHYQ KVEAEDDDDD DDDEDDEEEE AEEDVGVKLM 240 SQLATVVRRF GDGLERLEKR RMELMREIER DWMEMETKRA EMVMESQRYL VETIAGAFTS 300 AKKAKKARDS *
|