PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn389881
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 599aa    MW: 67217 Da    PI: 6.4318
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn389881genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM972.9e-302674091128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tksgy.W 83 
                 lp+G++F+P+d el+ e+L+ k+   +    + ++e+i++vd    i++++P++Lp  +k++ ++++fF++  ++yatg+rk+r+        ++g+ W
  Achn389881 267 LPAGVKFDPSDVELL-EHLASKCGVGNtkphIFIDEFIPTVDreegICYTHPENLP-GAKTDGSSVHFFHRIINAYATGQRKRRKihnqngmKQEGIrW 363
                 799************.999999876664556334445666655566**********.55678899*******************85666666335545* PP

         NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 ++tgk+k+v++ +g ++g kk++v+y  +++ +k+ k++W mh+y+l
  Achn389881 364 HKTGKTKSVME-NGVQKGYKKIMVLYrtSKKGSKPDKANWAMHQYHL 409
                 ***********.999***********5434667778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5001121.5451212IPR000719Protein kinase domain
SuperFamilySSF561127.69E-4413236IPR011009Protein kinase-like domain
Gene3DG3DSA:3.30.200.204.5E-121473No hitNo description
PfamPF077147.9E-71574IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Gene3DG3DSA:1.10.510.103.1E-3174208No hitNo description
PfamPF077142.7E-2475208IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
SuperFamilySSF1019415.89E-32259428IPR003441NAC domain
PROSITE profilePS5100528.311267428IPR003441NAC domain
PfamPF023654.9E-12268409IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    Send to blast
MHGSRFAAPT RLLYKNQTVA IKIVPKGDTS EEIAKREARF AREVAMLSRV QHKNLVKFIG  60
ACKEPVMVIV TELLLENLLL TADHKTVKLA DFGLAREESL TEMMTAETGT YRWMAPELYS  120
TVTLRQGEKK HYNHKVDAYS FAIVLWELIH NKLPFQGMSN LQAAYAAAFK NTRPSADDLP  180
EDLALIVTSC WREDPNARPT FSQIKQMLLN YLSTISPPEP AIPPRIFTYE NTVLPPKSPD  240
VGFVYHFHIC DSGNIPAKWV LHEWPGLPAG VKFDPSDVEL LEHLASKCGV GNTKPHIFID  300
EFIPTVDREE GICYTHPENL PGAKTDGSSV HFFHRIINAY ATGQRKRRKI HNQNGMKQEG  360
IRWHKTGKTK SVMENGVQKG YKKIMVLYRT SKKGSKPDKA NWAMHQYHLG TAEDEIGGQF  420
VVSKIFYQLQ KQSDNTDSSR VMEDSDLGNI QTTPRTPKTN TPNPPRPQKF FSCDDITNDY  480
LILPKSPAQE AEFITETSHP STSGPPYKEE TETHTWLAGE SQAVDENGVD DQLLCNENLN  540
SYVSLDDLGL NDGPSNDFSR LTRDAPGVDR NPPCGIADLE NLELDTPPDF QLAVSFFS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3p86_A6e-20621850303Serine/threonine-protein kinase CTR1
3p86_B6e-20621850303Serine/threonine-protein kinase CTR1
3ppz_A6e-20621850303Serine/threonine-protein kinase CTR1
3ppz_B6e-20621850303Serine/threonine-protein kinase CTR1
4uy9_A1e-1984215154273MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9
4uy9_B1e-1984215154273MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028118727.10.0SUPPRESSOR OF GAMMA RESPONSE 1-like
TrEMBLA0A3Q7FZU20.0A0A3Q7FZU2_SOLLC; Uncharacterized protein
STRINGXP_009622368.11e-135(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81752229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.15e-70NAC domain containing protein 85