PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn388561 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | NAC | ||||||||
Protein Properties | Length: 651aa MW: 74382.3 Da PI: 5.8557 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 181.3 | 2.4e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+++el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v s + Achn388561 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QM 102 79****************************.99***************6434555777**************************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv+y+grap+g +tdWvmheyrl Achn388561 103 RAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 99***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-63 | 4 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.961 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 651 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECEI NTGLQDAYAL CRVFKKSATG PKIGDHYVAS TSNNQISSDH 180 SSGIDLYSEG RCDQDLDSSG YNHMPMDTTS SPNNININIH GSSSMNTSTG ATDDNWMRYL 240 SEDAFGFNAP SFGNCGGISY PSSKVDIALE CARLQHRLSL PPLEVQDFSQ GGFFNTRMPQ 300 PSSIPHGNPN EQDILQEILS VAQVSQELIN QDSWGGNYAA SDDFSFLPHH THDQTHGMST 360 SRSIDIGGHA DVEFKIERSV ENLRWVGMSS DDLEKSFLED YKNVPIESIS NLQRREGHEA 420 QGERDDHINF NEFNETEANN FSLGFINETP NQNFLDDDDV DDFSSTPSFD VYDKVEVNHG 480 MFVSTRQVAE TFFHQMVPSE IVKVYLNPAV IHNYAMTKED SPTSHKTQWR KTMSPIITII 540 ALLLTYCLYF GENLEDERSV KRRERDFSAH EIMKMKKYNQ IKSIQAFIPV NLGWLKMKKP 600 KEVSWDYKKR EFWFVEESIS SVVLKKIIWP YLTLLLALCS IWVHHNVAPN * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-55 | 1 | 162 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-55 | 1 | 162 | 15 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-55 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-55 | 1 | 162 | 12 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028066844.1 | 0.0 | NAC domain-containing protein 45 isoform X2 | ||||
TrEMBL | A0A2R6Q1K3 | 0.0 | A0A2R6Q1K3_ACTCH; NAC domain-containing protein | ||||
STRING | VIT_04s0079g00280.t01 | 0.0 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1495 | 23 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-157 | NAC domain containing protein 28 |