PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn380681
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family C2H2
Protein Properties Length: 322aa    MW: 35922 Da    PI: 7.6613
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn380681genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.9e-0584107123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 y+Cp Cg+ F  + +L++H+   H
  Achn380681  84 YPCPACGEIFQKPNLLEQHQTIrH 107
                 99******************8877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.9384108IPR007087Zinc finger, C2H2
PROSITE patternPS00028086107IPR007087Zinc finger, C2H2
SuperFamilySSF563996.62E-11115320No hitNo description
Gene3DG3DSA:3.90.228.101.4E-5256320IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEHKTRKALS SSWSFLKRIL TRTQTHPNPN LNPTTTLSTR SSSVVSIVTP DTLDFDPPRT  60
RPTGSRPESD ISSDPQFPLR NDIYPCPACG EIFQKPNLLE QHQTIRHAVM ELNDWDSGKN  120
IVQIIFNTGW PEKAKDPKIH RVLKIHNSPI ILTRFEEYRE SVKLRAARNG VVRRRDERCL  180
ADGNELLRFY CATFLCELGQ NGNSSICNHQ FCGACGIIGS GFSPKMDGIS TLSTGFRAHV  240
AVPADIEEEF GFMGVKRAML VCRVIAGRVG CDPDYVDKED PGFDSVVGKG PGARMRLDEE  300
DELLVFNPRA VLPCFVIVYT V*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028051181.11e-158uncharacterized protein LOC114255830
TrEMBLA0A2R6QJA20.0A0A2R6QJA2_ACTCH; WD repeat-containing protein
STRINGcassava4.1_033577m1e-149(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118341821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29660.11e-110C2H2 family protein