PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn374511 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 190aa MW: 21297.6 Da PI: 11.6707 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.9 | 0.0002 | 122 | 163 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +E++R + ++ Lr+l+P + +K s Le+A++YI L Achn374511 122 AEKKREPVLQRKLRVLRRLVPGC-----RKISFPNLLEEATDYIAAL 163 688999999999**********9.....8***************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.309 | 114 | 163 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.16E-9 | 121 | 180 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.4E-7 | 122 | 175 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MASYSISNPE TNANRSHESK RKKRRKIEGE NHAEAVTIEK NRWKTATEQQ IYSTKLIEAL 60 RQSRRTSSSP ATAVRETADR VLAAAARGKT RWSRAILTSR LRPQLGHKKV KATGGVRWKK 120 PAEKKREPVL QRKLRVLRRL VPGCRKISFP NLLEEATDYI AALEMQIRAM ATLAESLSGP 180 SVRLGSDLS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | KRKKRRK |
2 | 21 | 25 | KKRRK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Atypical bHLH transcription factor probably unable to bind DNA. Negatively regulates brassinosteroid signaling. {ECO:0000269|PubMed:20023194}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028061682.1 | 7e-75 | transcription factor bHLH149-like | ||||
Refseq | XP_028061683.1 | 7e-75 | transcription factor bHLH149-like | ||||
Swissprot | O80482 | 4e-41 | BH149_ARATH; Transcription factor bHLH149 | ||||
TrEMBL | A0A2R6RFS7 | 1e-132 | A0A2R6RFS7_ACTCH; Transcription factor bHLH149 like | ||||
STRING | XP_009609092.1 | 3e-54 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1431 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06590.2 | 2e-26 | bHLH family protein |
Publications ? help Back to Top | |||
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