PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn369221 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | WRKY | ||||||||
Protein Properties | Length: 322aa MW: 35500 Da PI: 4.5027 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 75.9 | 5e-24 | 162 | 218 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e +++ ++v++++ +g+Hnh+ Achn369221 162 TDGYNWRKYGQKQVKSPQGSRSYYRCTYSDCHAKK-IEFCDHSNHVIDVISKGQHNHD 218 6********************************98.*********************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.4E-21 | 152 | 220 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.49E-20 | 159 | 220 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.5E-21 | 161 | 219 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 17.695 | 162 | 220 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.6E-17 | 163 | 218 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MNESKQRIEA LEEEAEKMID DEGGEDEEDE ESDEVDDDDD DDDGEGEVGE EKRRQVRVLA 60 PIEAKFDQVG ISHQQALASV MTEAAQAQLH NQVLSLGYPS SSELSPTSVT QSISSGPSPA 120 LLDQKLSPVV STNTACISKV EQQNSSNQKS ISVMPVVKTP STDGYNWRKY GQKQVKSPQG 180 SRSYYRCTYS DCHAKKIEFC DHSNHVIDVI SKGQHNHDPP RRINCTRECS LALPDVPDST 240 AHQVRMLSDS NPSTSSREFI QETPVLRETK RQNSSGSDGT AEIGIKEEHV DEPEPKRRQV 300 SLVGSQILVL IRYISCLADA V* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028113356.1 | 1e-115 | probable WRKY transcription factor 32 | ||||
TrEMBL | A0A2R6QHL7 | 1e-150 | A0A2R6QHL7_ACTCH; WRKY transcription factor | ||||
STRING | VIT_11s0037g00150.t01 | 3e-88 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9189 | 21 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-38 | WRKY DNA-binding protein 32 |