PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn367861
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family BES1
Protein Properties Length: 1015aa    MW: 113091 Da    PI: 6.4212
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn367861genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822150.99.8e-474806141134
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.ssl 98 
                 g++g+k+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+r D+n+Vl+AL+reAGw+ve+DGttyr +  p+  ++++g +  +s+ s+++  sl
  Achn367861 480 GAKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPAREDMNDVLAALAREAGWTVEPDGTTYRSS--PP--PSQMGVFPVRSVGSPVStGSL 574
                 6899******************************************************************44..33..46899999999999999899* PP

      DUF822  99 kssalaspvesysaspksssfpspssldsislasa....a 134
                 k++++++ ++ + ++++ ++++sp+sldsi +a+     +
  Achn367861 575 KNCSMKASLDCQPSVLRIEESLSPASLDSIVVAERdtksE 614
                 *******************************998753330 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.2E-48482623IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514455.69E-1346461007IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.801.5E-139649987IPR013781Glycoside hydrolase, catalytic domain
PRINTSPR007503.2E-35686700IPR001554Glycoside hydrolase, family 14
PfamPF013731.7E-52727987IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.2E-35800822IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.2E-35873892IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.2E-35907923IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.2E-35924935IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.2E-35942965IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1015 aa     Download sequence    Send to blast
MSVTTLIKEN GFHGPSANQI KSEADQVKAK CYSKVKAEQP DETACISSIN EYDEWGQSTL  60
SDSDSRAGSS SSRAFTTRSL GPPSRSLSCF RFFPGNSIFR LSSATSLGSS TADPSASTSF  120
TVSNEEEQHH VHRDPARGSV NRNGSSQGRE FLPACLINRL PSPQFDDFAS GSLESNRTSV  180
FFDNLLDDQI TSALNVVARD VDNPMGEFNV NLFSVRNHTD IESMETTRLA DRRIGAQEPV  240
ERNVRFSRTL SVGRLRDRVL RRSSFPDSTF SALQQEREVR DVSQPGGTQA LGGGTGALSS  300
NENASISSGS SIYASSGMPS SFYGSQDSEV ETSRARDTRY HDLLEHRSNF LERRRRIRSQ  360
VLDEIHQQSV VLSSRSSVSP IGSVPAPNEV VESLPVKLYS KSQKHLNEEA AQLHATVRML  420
IPVHPFLIAA ATFSPAFLKF IGELGEEIHQ CYICLVEYEE GDSHRRPRGF AAAAATVGGG  480
AKGKKEREKE KERTKLRERH RRAITSRMLA GLRQYGNFPL PAREDMNDVL AALAREAGWT  540
VEPDGTTYRS SPPPSQMGVF PVRSVGSPVS TGSLKNCSMK ASLDCQPSVL RIEESLSPAS  600
LDSIVVAERD TKSEKYTSAS PINSPECLGA DQLMGDVGSR VHGTDFTGTP YVPVYVMIAA  660
SVITNFCQLI DPEGVRHELR HLKSLHVDGV VVDCWWGIVE GWSPQKYEWS GYRELFTIVR  720
EFQLKLQWVL EIGKENPDIF FTDREGRRNT ECLSWGIDKE RVLKGRTGIE VYFDFMRSFR  780
SEFDDFFTEG LISAVEIGLG ASGELKYPSF SERMGWRYPG IGEFQCYDKY SQQNLRKAAK  840
LRGHSFWARG PDNAGQYNSR PHETGFFCER GDYDSYYGRF FLHWYAQSLI DHADNVLYLA  900
SLAFEDTRLV VKIPAVYWWY KTASHAAELT AGYYNPTNQD GYSPVFEILK KHSVTMKFVC  960
SGLQVPCQEI NDARADPEGL SWQLSSLVQG TIFFPELDYF VKSMHGEIAG GREL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wdq_A1e-10065198611368Beta-amylase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP7394640.0KP739464.1 Camellia sinensis beta-amylase 8 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028118850.10.0beta-amylase 8 isoform X2
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A2R6Q3130.0A0A2R6Q313_ACTCH; Beta-amylase
STRINGEOY253980.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0beta-amylase 2
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]