PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn354801 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bHLH | ||||||||
Protein Properties | Length: 249aa MW: 27377.9 Da PI: 4.4631 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.5 | 0.00013 | 152 | 197 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkas..kapskKlsKaeiLekAveYIksLq 55 RR++i++++ L++l+P + ++ + Ka +L + ++Y+ sLq Achn354801 152 RREKIRHRMKFLQDLVPGCNklLGNFQITGKAVMLDEIINYVLSLQ 197 9*****************7778888899*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.594 | 140 | 196 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-8 | 151 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.56E-5 | 152 | 201 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 6.4E-8 | 153 | 202 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MDNGVDGELG YENRGHSLLD CLSLGNFIPL PSDEVLGVNS SFTGGWTPLD AVEYNAEFVT 60 SLISCHGLID NSYVDIQESL AELEPNMTCF GSETLSEMDS FFIEHRSRLI TNFGGSTDYP 120 LEGSGSKNEK ALLPQSSTHN YAQSQEDCKL VRREKIRHRM KFLQDLVPGC NKLLGNFQIT 180 GKAVMLDEII NYVLSLQRQV ELQGTACCLR PGPGETAAVT LNCPKFLSMK LATVYPETNA 240 EPEQILSR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028053572.1 | 4e-31 | transcription factor bHLH49-like isoform X3 | ||||
Refseq | XP_028053574.1 | 2e-31 | transcription factor bHLH49-like isoform X5 | ||||
TrEMBL | A0A2R6S161 | 1e-103 | A0A2R6S161_ACTCH; Transcription factor bHLH74 like |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.3 | 2e-22 | bHLH family protein |